Publications

Important Notice: This page contains links to PDF files of articles that may be covered by copyright. You may browse the articles at your convenience. (in the same spirit as you may read a journal or a proceeding article in a public library). Retrieving, copying, or distributing these files, however, may violate the copyright protection law. We recommend that the user abides international law in accessing this directory.

Type Year Author Title
Displaying 1-25 of 1695 result(s).
S. Ren, N. Ahmed, K.L.M. Bertels, Z. Al-Ars, GPU Accelerated Sequence Alignment with Traceback for GATK HaplotypeCaller (to appear: January 2019), 17th Asia-Pacific Bioinformatics Conference (APBC 2019), 14-16 Januari 2019, Wuhan, China , accepted for publication in BMC Genomics 2019 [Conference Paper]
E.J. Houtgast, V.M. Sima, K.L.M. Bertels, Z. Al-Ars, Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM (to appear: October 2018), 18th IEEE International Conference on BioInformatics and BioEngineering (BIBE 2018), 29-31 October 2018, Taichung, Taiwan [Conference Paper]
S. Ren, N. Ahmed, K.L.M. Bertels, Z. Al-Ars, An Efficient GPU-based de Bruijn Graph Construction Algorithm for Micro-Assembly (to appear: October 2018), 18th IEEE International Conference on BioInformatics and BioEngineering (BIBE 2018), 29-31 October 2018, Taichung, Taiwan [Conference Paper]
M. Zandrahimi, P. Debaud, A. Castillejo, Z. Al-Ars, Cost Effective Adaptive Voltage Scaling Using Path Delay Fault Testing (to appear: September 2018), 16th IEEE East-West Design & Test Symposium (EWDTS 2018), 14-17 September 2018, Kazan, Russia [Conference Paper]
L. Lao, B. van Wee, I. Ashraf, J. van Someren, N. Khammassi, K.L.M. Bertels, C.G. Almudever, Mapping of Lattice Surgery-based Quantum Circuits on Surface Code Architectures 1707_mapping_of_lattice_surgerybased_quantum_circuits_on_surfac.pdf (September 2018), Journal: Quantum Sci. Technol. 4,015005 (2019) , https://doi.org/10.1088/2058-9565/aadd1a [Technical Report]
J. Fang, J. Chen, P. Hofstee, Z. Al-Ars, J. Hidders, A High-Bandwidth Snappy Decompressor in Reconfigurable Logic (September 2018), International Conference on Hardware/Software Codesign and System Synthesis (CODES+ISSS 2018), 30 September - 5 October 2018, Torino, Italy [Conference Paper]
E.J. Houtgast, V.M. Sima, K.L.M. Bertels, Z. Al-Ars, Hardware Acceleration of BWA-MEM Genomic Short Read Mapping for Longer Read Lengths 1701_hardware_acceleration_of_bwamem_genomic_short_read_mapping.pdf (August 2018), Computational Biology and Chemistry (Comput. Biol. Chem), volume 75 [Journal Paper]
D.H.P. Kraak, M. Taouil, S. Hamdioui, M. Wasif, F. Catthoor, A. Chatterjee, A. Singh, H.J. Wunderlich, N. Karimi, Device Aging: A Reliability and Security Concern 1715_device_aging_a_reliability_and_security_concern.pdf (July 2018), 23rd IEEE European Test Symposium (ETS 2018), 28 May - 1 June 2018, Bremen, Germany [Conference Paper]
I.O. Agbo, M. Taouil, D.H.P. Kraak, S. Hamdioui, P Weckx, S. Cosemans, F. Catthoor, W Dehaene, Impact and Mitigation of SRAM Read Path Aging (June 2018), Microelectronics Reliability, volume 87 [Journal Paper]
X. Fu, M. A. Rol, C.C. Bultink, J. van Someren, N. Khammassi, I. Ashraf, R.F.L. Vermeulen, J. C. de Sterke, W.J. Vlothuizen, R. N. Schouten, C.G. Almudever, L. DiCarlo, K.L.M. Bertels, A Microarchitecture for a Superconducting Quantum Processor 1695_a_microarchitecture_for_a_superconducting_quantum_processor.pdf (May 2018), IEEE Micro, volume 38, issue 3 , Top Picks from the 2017 Computer Architecture Conferences [Journal Paper]
P. H. E. Becker, A. L. Sartor, M Brandalero, TT Jost, S. Wong, L. Carro, A.C.S. Beck, A Low-Cost BRAM-Based Function Reuse for Configurable Soft-Core Processors in FPGAs 1703_a_lowcost_brambased_function_reuse_for_configurable_soft.pdf (May 2018), The 14th International Symposium on Applied Reconfigurable Computing (ARC 2018), 2-4 May 2018, Santorini, Greece [Conference Paper]
AG Erichsen, A. L. Sartor, J.D. Sousa, M Pereira, S. Wong, A.C.S. Beck, ISA-DTMR: Selective Protection in Configurable Heterogeneous Multicores 1704_isadtmr_selective_protection_in_configurable_heterogeneou.pdf (May 2018), The 14th International Symposium on Applied Reconfigurable Computing (ARC 2018), 2-4 May 2018, Santorini, Greece [Conference Paper]
J.D. Sousa, A. L. Sartor, L. Carro, M.B. Rutzig, S. Wong, A.C.S. Beck, DIM-VEX: Exploiting Design Time Configurability and Runtime Reconfigurability 1705_dimvex_exploiting_design_time_configurability_and_runtime.pdf (May 2018), The 14th International Symposium on Applied Reconfigurable Computing (ARC 2018), 2-4 May 2018, Santorini, Greece [Conference Paper]
Y. Jiang, N. Cucu Laurenciu, S.D. Cotofana, On Carving Basic Boolean Functions on Graphene Nanoribbons Conduction Maps 1708_on_carving_basic_boolean_functions_on_graphene_nanoribbons.pdf (May 2018), IEEE International Symposium on Circuits and Systems (ISCAS), 27-30 May 2018, Florence [Conference Paper]
J.J. Hoozemans, J. van Straten, Z. Al-Ars, S. Wong, Evaluating Auto-adaptation Methods for Fine-Grained Adaptable Processors 1702_evaluating_autoadaptation_methods_for_finegrained_adaptab.pdf (April 2018), 31st International Conference on Architecture of Computing Systems (ARCS2018), 9-12 April 2018, Braunschweig, Germany [Conference Paper]
M. Zandrahimi, P. Debaud, A. Castillejo, Z. Al-Ars, An Industrial Case Study of Low Cost Adaptive Voltage Scaling Using Delay Test Patterns 1684_an_industrial_case_study_of_low_cost_adaptive_voltage_scali.pdf (March 2018), Design, Automation and Test in Europe (DATE 2018), 19-23 March 2018, Dresden, Germany [Conference Paper]
M. Zandrahimi, P. Debaud, A. Castillejo, Z. Al-Ars, Industrial Evaluation of Transition Fault Testing for Cost Effective Offline Adaptive Voltage Scaling 1685_industrial_evaluation_of_transition_fault_testing_for_cost.pdf (March 2018), Design, Automation and Test in Europe (DATE 2018), 19-23 March 2018, Dresden, Germany [Conference Paper]
S. Ren, K.L.M. Bertels, Z. Al-Ars, Efficient Acceleration of the Pair-HMMs Forward Algorithm for GATK HaplotypeCaller on GPUs 1689_efficient_acceleration_of_the_pairhmms_forward_algorithm_f.pdf (March 2018), Evolutionary Bioinformatics, volume 14 , CC BY-NC [Journal Paper]
J. Chen, Z. Al-Ars, P. Hofstee, A Matrix-Multiply Unit for Posits in Reconfigurable Logic Using (Open)CAPI 1690_a_matrixmultiply_unit_for_posits_in_reconfigurable_logic_u.pdf (March 2018), Conference for Next Generation Arithmetic (CoNGA), 28 March 2018, Sentosa, Singapore , CC-BY [Conference Paper]
J. Yu, H.A. Du Nguyen, L. Xie, M. Taouil, S. Hamdioui, Memristive Devices for Computation-In-Memory (March 2018), Design, Automation and Test in Europe (DATE 2018), 19-23 March 2018, Dresden, Germany [Conference Paper]
M.C.R. Fieback, M. Taouil, S. Hamdioui, M. Rovatti, Ionizing radiation modeling in DRAM transistors (March 2018), IEEE 19th Latin-American Test Symposium (LATS 2018), 12-16 March 2018, Sao Paulo, Brazil , Best paper award! [Conference Paper]
D.H.P. Kraak, I.O. Agbo, M. Taouil, S. Hamdioui, P Weckx, S. Cosemans, F. Catthoor, Degradation analysis of high performance 14nm FinFET SRAM 1714_degradation_analysis_of_high_performance_14nm_finfet_sram.pdf (March 2018), Design, Automation and Test in Europe (DATE 2018), 19-23 March 2018, Dresden, Germany [Conference Paper]
P. Bhosale, M. Staring, Z. Al-Ars, F. Berendsen, GPU-Based Stochastic-Gradient Optimization for Non-Rigid Medical Image Registration in Time-Critical Applications 1652_gpubased_stochasticgradient_optimization_for_nonrigid_me.pdf (February 2018), SPIE Medical Imaging Conference, 10-15 February 2018, Houston (TX), United States [Conference Paper]